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Humboldt-Universitaet zu Berlin - SFB 1315

Publications

 The majority of the CRC's publications linked below are available on publicly accessible journal websites and/or repositories. In line with our funding agency the DFG, over 85% are currently openly accessible.

2020

  • Aerts H, Schirner M, Dhollander T, Jeurissen B, Achten E, Van Roost D, Ritter P, Marinazzo D (2020) Modeling brain dynamics after tumor resection using The Virtual Brain. NeuroImage. doi: 10.1016/j.neuroimage.2020.116738. Link
  • Aru J, Suzuki M, Larkum ME (2020) Cellular mechanisms of conscious processing. Trends Cogn Sci. doi: 10.1016/j.tics.2020.07.006. Link   
  • Battaglia D, Boudou T, Hansen ECA, Lombardo D, Chettouf S, Daffertshofer A, McIntosh AR, Zimmermann J, Ritter P, Jirsa V (2020) Dynamic functional connectivity between order and randomness and its evolution across the human adult lifespan. NeuroImage. doi: 10.1016/j.neuroimage.2020.117156. in press. Link
  • Benichov JI, Vallentin D (2020). Inhibition within a premotor circuit controls the timing of vocal turn-taking in zebra finches. Nat Commun. doi: 10.1038/s41467-019-13938-0. Link
  • Beyer F, Prehn K, Wüsten KA, Villringer A, Ordemann J, Flöel A, Witte AV (2020) Weight loss reduces head motion: re-visiting a major confound in neuroimaging. Hum Brain Mapping doi: 10.1002/hbm.24959. Link
  • Cakan C, Obermayer K (2020) Biophysically grounded mean-field models of neural populations under electrical stimulation. PLoS Comput Biol. doi: 10.1371/journal.pcbi.1007822. Link
  • Clemens AM, Wang H, Brecht M (2020) The lateral septum mediates kinship behavior in the rat. Nat Commun. doi: 10.1038/s41467-020-16489-x. Link

  • D'Albis T, Kempter R (2020) Recurrent amplification of grid-cell activity. Hippocampus. in print.

  • Evangelista R, Cano G, Cooper C, Schmitz D, Maier N, Kempter R (2020) Generation of sharp wave-ripple events by disinhibition. J Neurosci. doi: 10.1523/JNEUROSCI.2174-19.2020. Link
  • Fischer M, Ruhnau J, Schulze J, Obst D, Flöel A, Vogelgesang A (2020) Spermine and spermidine modulate T-cell function in older adults with and without cognitive decline ex vivo. Aging. doi: 10.18632/aging.103527. Link
  • Gidon A, Zolnik TA, Fidzinski P, Bolduan F, Papoutsi A, Poirazi P, Holtkamp M, Vida I, Larkum ME (2020). Dendritic action potentials and computation in human layer 2/3 cortical neurons. Science. doi: 10.1126/science.aax6239. Link
  • Huang S, Piao C, Beuschel CB, Götz T, Sigrist SJ (2020). Presynaptic activity zone plasticity encodes sleep need in Drosophila. Curr Biol. doi: 10.1016/j.cub.2020.01.019. Link
  • Koren V, Andrei AR, Hu M, Dragoi V, Obermayer K (2020) The intersection between the representation of the stimuli and the choice by neural ensembles in the primary visual cortex of the macaque. bioRxiv. doi: 10.1101/2020.01.10.901504. Link
  • Liu KY, Kievit RA, Tsvetanov KA, Betts MJ, Düzel E, Rowe JB, CAN-Cam, Howard R, Hämmerer D (2020) Noradrenergic-dependent functions are associated with age-related locus coeruleus signal intensity differences. Nat Commun. doi: 10.1038/s41467-020-15410-w. Link
  • Lucchese G, Flöel A (2020) SARS-CoV-2 and Guillain-Barré syndrome: molecular mimicry with human heat shock proteins as potential pathogenic mechanism. Cell Stress Chap 25_731-735. doi: 10.1007/s12192-020-01145-6. Link
  • Mak CCY, Doherty D, Lin AE, Vegas N, Cho MT, Viot G, Dimartino C, Weisfeld-Adams J, Lessel D, Joss S, Li C, Gonzaga-Jauregui C, Zarate YA, Ehmke N, Horn D, Troyer C, Kant SG, Lee Y, Ishak GE, Leung G, Pritchard AB, Yang S, Bend EG, Filippini F, Roadhouse C, Lebrun O, Mehaffey MG, Martin P-M, Apple B, Millan F, Puk O, Hoffer MJV, Henderson JB, McGowan R, Wentzensen IM, Pei S, Zahir FR, Yu M, Gibson WT, Seman A, Steeves M, Murrell JR, Luettgen S, Francisco E, Strom TM, Amlie-Wolf L, Kaindl AM, Wilson WG, Halbach S, Basel-Salmon L, Lev-El N, Denecke J, Vissers LELM, Radtke K, Chelly J, Zackai E, Friedman JM, Bamshad MJ, Nickerson DA, UWash CMG, Reid RR, Devriendt K, Chae JH, Stolerman E, McDougall C, Powis Z, Bienvenu T, Tan TY, Orenstein N, Dobyns WB, Shieh JT, Choi M, Waggoner D, Gripp KW, Parker MJ, Stoller J, Lyonnet S, Cormier-Daire V, Viskochil, Hoffman TL, Amiel J, Chung BHY, Gordon CT (2020) MN1 C-terminal truncation syndrome is a novel neurodevelopmental and craniofacial disorder with partial rhombencephalosynapsis. Brain. doi: 10.1093/brain/awz379. Link
  • Michalikova M, Remme MWH, Schmitz D, Schreiber S, Kempter R (2020) Spikelets in pyramidal neurons: generating mechanisms, distinguishing properties, and functional implications. Rev Neurosci. doi: 10.1515/revneuro-2019-0044. Link
  • Moon DU, Esfahani-Bayerl N, Finke C, Salchow DJ, Menk M, Bayerl M, Kempter R, Ploner CJ (2020) Propofol modulates early memory consolidation in humans. eNeuro. doi:  10.1523/ENEURO.0537-19.2020. Link
  • Moreno-Velasquez L, Lo H, Lenzi S, Kaehne M, Breustedt J, Schmitz D, Rüdiger S, Johenning FW (2020) Circuit-specific dendritic development in the piriform cortex. eNeuro. doi: 10.1523/ENEURO.0083-20.2020. Link
  • Nitzan N, McKenzie S, Beed P, English DF, Oldani S, Tukker JJ, Buzsáki G, Schmitz D (2020) Propagation of hippocampal ripples to the neocortex by way of a subiculum-retrosplenial pathway. Nat Commun 11(1947). doi: 10.1038/s41467-020-15787-8.  Link
  • Oldani S, Moreno-Velasquez L, Stumpf A, Rosenmund C, Schmitz D, Rost BR (2020) SynaptoPAC, an Optogenetic tool for induction of presynaptic plasticity. bioRxiv Link
  • Overfeld J, Entringer S, Rsmussen JM, Heim CM, Styner MA, Gilmore JH, Wadhwa PD, Buss C (2020) Neonatal hippocampal volume moderates the effects of early postnatal enrichment on cognitive development. Dev Cogn Neurosci. doi: 10.1016/j.dcn.2020.100820. Link
  • Pajkert A, Ploner CJ, Lehmann T-N, Witte VA, Oltmanns F, Sommer W, Holtkamp M, Heekeren HR, Finke C (2020) Early volumetric changes of hippocampus and medial prefrontal cortex following medial temporal lobe resection. Eur J Neurosci. doi: 10.1111/ejn.14784. Link
  • Papadopoulos IN, Jouhanneau J-S, Takahashi N, Kaplan D, Larkum M, Poulet J, Judkewitz B (2020) Dynamic conjugate F-SHARP microscopy. Light Sci Appl. doi: 10.1038/s41377-020-00348-x. Link
  • Paricio-Montesinos R, Schwaller F, Udhayachandran A, Rau F, Walcher J, Evangelista R, Vriens J, Voets T, Poulet JFA, Lewin GR (2020) The sensory coding of warm perception. Neuron 106, 1-12. doi: 10.1016/j.neuron.2020.02.035. Link
  • Raffington L, Falck J, Heim C, Mather M, Shing YL (2020) Effects of stress on 6- and 7-year-old children's emotional memory differs by gender. J Exp Child Psychol. doi: 10.1016/j.jecp.2020.104924. Link
  • Reifenstein E & Kempter R (2020) Synaptic learning rules for sequence learning. bioRxiv Link
  • Schwarz C, Horn N, Benson G, Calzado IW, Wurdack K, Pechlaner R, Grittner U, Wirth M, Flöel A (2020) Spermidine intake is associated with cortical thickness and hippocampal volume in older aldults. NeuroImage. doi: 10.1016/j.neuroimage.2020.117132. Link
  • Suzuki M, Larkum ME (2020) General anesthesia decouples cortical pyramidal neurons. Cell. doi: 10.1016/j.cell.2020.01.024. Link
  • Takahashi N, Ebner C, Sigl-Glöckner J, Moberg S, Nierwetberg S, Larkum ME (2020) Active dendritic currents gate descending cortical outputs in perception. Nat Neurosci. doi: 10.1038/s41593-020-0677-8. Link
  • Tantirigama MLS, Zolnik T, Judkewitz, Larkum ME, Sachdev RNS (2020) Perspective on the multiple pathways to changing brain states. Front Syst Neurosci. doi: 10.339/fnsys.2020.00023. Rev Article. Link
  • Tukker JJ, Beed P, Schmitz D, Larkum ME, Sachdev RNS (2020) Up and down states across somatosensory, entorhinal, and hippocampal cortices. Front Syst Neurosci. doi: 10.3389/fnsys.2020.00022. Rev Article. Link
  • Valova V, Kochan A, John R, Prager C, Schneider J, Kaindl AM (2020) Early onset, long illness duration, epilepsy type, and polypharmacy have an adverse affect on psychosocial outcome in children with epilepsy. Neuropediatrics. doi: 10.1055/s-0039-3399529. Link
  • Vasilevsky NA, Hosseini M, Teplitzky S, Ilik V, Mohammadi E, Schneider J, Kern B, Colomb J, Edmunds SC, Gutzman K, Himmelstein DS, White M, Smith B, O'Keefe L, Haendel M, Holmes KL (2020) Is authorship sufficient for today's collaborative research? A call for contributor roles. Account Res. doi: 10.1080/08989621.2020.1779591. Link
  • Woitkuhn J, Ender A, Beuschel CB, Maglione M, Matkovic-Rachid T, Huang S, Lehmann M, Geiger JRP, Sigrist SJ (2020). The Unc13A isoform is important for phasic release and olfactory memory formation at mushroom body synapses. J Neurogenet. doi: 10.1080/01677063.2019.1710146. Link
  • Zaqout S, Ravindran E, Stoltenburg-Didinger G, Kaindl AM (2020) Congenital microcephaly-linked CDK5RAP2 affects eye development. Ann Hum Genet. doi: 10.1111/ahg.12343.  Link

2019

  • Alevi D, Kempter R, Sprekeler H (2019) From episodic to semantic memory: A computational model. Proceedings CCN Berlin 2019. Link
  • Bach DR, Hoffmann M, Finke C, Hurlemann R,  Ploner CJ (2019) Disentangling hippocampal and amygdala contribution to human anxiety-like behaviour. J Neurosci doi.org/10.1523/JNEUROSCI.0412-19.2019. Link
  • Bhukel A, Beuschel CB, Maglione M, Lehmann M, Juhász G, Madeo F, Sigrist SJ (2019) Autophagy within the mushroom body protects from synapse aging in a non-cell autonomous manner. Nat Commun.  doi: 10.1038/s41467-019-09262-2. Link
  • Dominiak SE, Nashaat MA, Sehara K, Oraby H, Larkum ME, Sachdev RNS (2019) Whisking asymmetry signals motor preparation and the behavioral state of mice. J Neurosci. doi: 10.1523/JNEUROSCI.1809-19.2019. Link
  • Düzel E, Acosta-Cabronero J, Berron D, Biessels GJ, Björkman-Burtscher I, Bottlaender M et al. (2019) European Ultrahigh-field Imaging Network for Neurodegenerative Diseases (EUFIND): Working Group Summaries for European Joint Programming for Neurodegenerative Research (JPND), in Alzheimer's & Dementia. doi: 10.1016/j.dadm.2019.04.010. Link
  • Jouhanneau JS, Poulet JFA (2019) Multiple two-photon targeted whole-cell patch-clamp recordings from monosynaptically connected neurons in vivo. Front Synaptic Neurosci doi: 10.3389/fnsyn.2019.00015. Link
  • Koren V, Andrei AR, Hu M, Dragoi V, Obermayer K (2019) Reading-out task variables as a low-dimensional reconstruction of neural spike trains in single trials. PLoS One. doi: 10.1317/journal.pone.0222649. Link
  • Liang YT (2019) (PhD AG Sigrist) Emerging concepts and functions of autophagy as a regulator of synaptic components and plasticity. Cells. doi: 10.3390/cells8010034. Link
  • Lucchese G, Flöel A, Stahl B (2019) Cross-reactivity as a mechanism linking infections in stroke. Front Neurol. doi: 10.3389/fneur.2019.00469. Link
  • McColgan T, Kuokkanen PT, Carr CE, Kempter R (2019) Dynamics of synaptic extracellular field potentials in the nucleus laminaris of the barn owl. J Neurophysiol. doi: 10.1152/jn.00648.2017. Link
  • Quade B, Camacho M, Zhao X, Orlando M, Trimbuch T, Xu J, Li W, Nicastro D, Rosenmund C, Rizo J (2019) Membrane bridging by Munc13-1 is crucial for neurotransmitter release. eLife. doi: 10.7554/eLife.42806. Link
  • Raccuglia D, Huang S, Ender A, Heim MM, Laber D, Suárez-Grimalt R, Liotta A, Sigrist SJ, Geiger JRP, Owald D (2019) Network-specific synchronization of electrical slow-wave oscillations regulates sleep drive in Drosophila. Curr Biol. doi: 10.1016/j.cub.2019.08.070. Link
  • Rao RP, von Heimendahl M, Bahr V, Brecht M (2019) Neuronal responses to conspecifics in the ventral CA1. Cell Rep 27 (12), 3460-3472e3. doi: 10.1016/j.celrep.2019.05.081.  Link
  • Sehara K, Bahr V, Mitchinson B, Pearson MJ, Larkum ME, Sachdev RNS (2019) Fast, flexible closed-loop feedback: Tracking movement in "real-millisecond time". eNeuro doi: 10.1523/ENEURO.0147-19.2019. Link
  • Shen K, Bezgin G, Schirner M, Ritter P, Everling S, McIntosh AR (2019) A macaque connectome for large-scale network simulations in The Virtual Brain. Sci Data 6:123. doi: 10.1038/s41597-019-0129-z. Link
  • Shing YL, Finke C, Hoffmann M, Pajkert A, Heekeren HR, Ploner CJ (2019) Integrating across memory episodes: developmental trends. PLoS One. doi: 10.1371/journal.pone.0215848. Link
  • Sigl-Glöckner J, Maier E, Takahashi N, Sachdev R, Larkum M, Brecht M (2019) Effects of sexual experience and puberty on mouse genital cortex revealed by chronic imaging. Curr Biol. doi: 10.1016/j.cub.2019.08.062. Link
  • Stefanovski L, Triebkorn P, Spiegler A, Diaz-Cortes, M-A, Solodkin A, Jirsa V, McIntosh AR, Ritter P (2019) Linking molecular pathways and large-scale modeling to assess candidate disease mechanisms and pharmacodynamics in Alzheimer's disease. Front Comput Neurosci. doi: 1033.89/fncom.2019.00054. Link
  • von der Hagen M, Becker LL, Wienker TF, Smitka M, Musante L, Ropers HH, Huebner A, Hu H, Kaindl AM (2019) Just expect it: Compound heterozygous variants of PIMT1 in a consanguineous family - the role of next generation sequencing in neuromuscular disorders. Neuropediatrics doi: 10.1055/s-0039-1695787. Link

2018

  • Holzbecher A, Kempter R (2018) Interneuronal gap junctions increase synchrony and robustness of hippocampal ripple oscillations. Eur J Neurosci.  doi: 10.1111/ejn.14267. Link

  • Michalikova M, Remme MWH, Kempter, R (2018) Extracellular waveforms reveal an axonal origin of spikelets in pyramidal neurons. J Neurophysiol.  doi: 10.1152/jn.00463.2017. Link

SFB1315 Press


SFB1315 members, please cite DFG funding in your SFB1315-based publications:

"Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – Project number 327654276 – SFB 1315."