Humboldt-Universität zu Berlin - SYSTHER

Publications / >>Talks

2012

• Gruden K, Hren M, Herman A, Blejec A, Albrecht T, Selbig J, Bauer C, Schuchardt J, Or‐Guil M, Zupančič K, Švajger U, Štabuc B, Ihan A, Kopitar AN, Ravnikar M, Knežević M, Rožman P, Jeras MA. “crossomics” study analysing variability of different components in peripheral blood of healthy Caucasoid individuals. PLoS ONE. 2012, 7(1): e28761  

2011

• Ardebili SY, Zajc I, Gole B, Campos B, Herold Mende C, Drmota S, Lah Turnšek T. CD133/prominin1 is prognostic for GBM patient's survival, but inversely correlated with cysteine cathepsine' expression in gliobastoma derived spheroids Radiol. oncol. (Ljubl.), 2011, 45(2): 102-115 
• Castino R, Pucer A, Veneroni R, Morani F, Peracchio C, Lah Turnšek T, Isidoro C. Resveratrol reduces the invasive growth and promotes the acquisition of a long-lasting differentiated phenotype in human glioblastoma cells. J. Agric. Food Chem. 2011, 59(8):4264-4272  
• Grau S, Thorsteinsdottir J, von Baumgarten L, Winkler F, Tonn JC, Schichor C. Bevacizumab can induce reactivity to VEGF-C and -D in human brain an tumour derived endothelial cells. J. Neurooncol. 2011: 104(1):103-112 
• Jürchott K, Guo KT, Catchpole G, Feher K, Willmitzer L, Schichor C, Selbig J. 2011.Comparison of metabolite profiles in U87 glioma cells and mesenchymal stem cells. Biosystems 105(2): 130-139 
• Kenig S, Frangez R, Pucer A, Lah Turnšek T. Inhibition of cathepsin L lowers the apoptotic threshold of glioblastoma cells by up-regulating p53 and transcription of caspases 3 and 7. Apoptosis. 2011, 16(7): 671-682 
• Or-Guil M, Wittenbrink N, Faro J. 2011. Aspects of modeling antibody affinity maturation: What data are we still missing? In: III International Symposium Proceedings Topical Problems of Biophotonics, Nizhny Novgorod, 172-173 
• Podpecan V, Lavrac N, Mozetic I, Igor, Kralj Novak P, Trajkovski I, Langohr L, Kulovesi K, Toivonen H, Petek M, Motaln H, Gruden K. SegMine workflows for semantic microarray data analysis in Orange4WS. BMC Bioinformatics. 2011, 12: 416   
• Schichor C, Albrecht V, Korte B, Buchner A, Riesenberg R, Mysliwietz J, Paron I, Motaln H, Lah Turnšek T, Jürchott K, Selbig J, Tonn JC. Mesenchymal stem cells and glioma cells form a structural as well as a functional syncytium in vitro. Experimental Neurology. 2011, Dec 29 
• Weiser AA, Wittenbrink N, Zhang L, Schmelzer AI, Valai A, Or-Guil M. 2011. Affinity maturation of B cells involves not only a few but a whole spectrum of relevant mutations. Int Immunol 23:345-356 
• Wittenbrink N, Klein A, Weiser AA, Schuchhardt J, Or-Guil M. 2011. Is there a typical germinal center? A large-scale immunohistological study on the cellular composition of germinal centers during the hapten-carrier-driven primary immune response in mice. J Immunol. 2011;187(12): 6185-6196 
• Wittenbrink N, Or-Guil M. 2011. Is there a typical germinal center? In: Proceedings III International Symposium Topical Problems of Biophotonics, Nizhny Novgorod, 203-204

 2010

2009

• Colin C, Voutsinos Porche B, Nanni I, Fina F, Metellus P, Intagliata D, Baeza N, Bouvier C, Delfino C, Loundou A, Chinot O, Lah Turnšek T, Kos J, Martin P-M, Ooufik L'H, Figarella-Branger D. High expression of cathepsin B and plasminogen activator inhibitor type-1 are strong predictors of survival in glioblastomas. Acta Neuropathol. 2009, 118: 745-754  
• Gole B, Duran Alonso MB, Dolenc V, Lah Turnšek T. Post-translational regulation of cathepsin B, but not of other cysteine cathepsins, contributes to increased glioblastoma cell invasiveness in vitro. Pathol Oncol Res. 2009, 15(4): 711-723 
• Lavrač N, Kralj Novak P,  Mozetič I, Podpečan V, Motaln H, Petek M, Gruden K. Semantic Subgroup Discovery: Using Ontologies in Microarray Data Analysis. EMBC 2009 

• Motaln H, Schichor C, Lah TT. Human Mesenchymal Stem Cells and Their Use in Cell-Based Therapies. Review article. Cancer (2010) 116(11): 2519-2530 
• Mozetič I, Podpečan V, Motaln H, Petek M, Gruden K. Semantic Subgroup Discovery: Using Ontologies in Microarray Data Analysis. EMBC 2009 
• Røsland GV, Svendsen A, Torsvik A, Sobala E, McCormack Immervoll H, Mysliwietz J, Tonn JC, Goldbrunner R, Lonning PE, Bjerkvig R, Schichor C. Long-term cultures of bone marrow-derived human mesenchymal stem cells frequently undergo spontaneous malignant transformation. Cancer Res. (2009) 69(13): 5331-5339 
• Strojnik T, Kavalar R, Zajc I, Diamandis EP, Oikonomopoulou K, Lah Turnšek T. Prognostic impact of CD68 and kallikrein 6 in human glioma. Anticancer res. 2009, 29(8): 3269-3279

2008

• Lah Turnšek T, Obermajer N, Duran Alonso MB, Kos J. Cysteine cathepsins and cystatins as cancer biomarkers. V: EDWARDS, Dylan R. The cancer degradome : proteases and cancer biology. New York: Springer, 2008: 585-623 
• Metellus P, Nanni I, Trinkhaus M, Lah Turnšek T. Implications pronostiques de différents marqueurs biologiques das lens méningiomes intracrâniens : à propos de 120 cas = Prognostic implications of biologic markers in intracranial meningiomas : 120 cases. Neuro-chir. (Paris). 2008, 54(6): 750-756 
• Rotter A, Hren M, Baebler Š, Blejec A, Gruden K. Finding differentially expressed genes in two-channel DNA microarray datasets: how to increase reliability of data preprocessing. Omics (2008) 12(3): 171-182. 

Press Releases

• MicroDiscovery 12.03.2009 (PDF)
• Laborjournal 4/2010 (PDF)
• Portal 2/2010 (PDF)